Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 RPL5P20-201ENST00000403848 896 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 RN7SKP125-201ENST00000410481 302 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 EEF1B2P6-201ENST00000445713 673 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 KARSP2-201ENST00000415696 1639 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 RPS7P12-201ENST00000422385 582 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 SRSF1P1-201ENST00000424058 520 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 BX119321.1-201ENST00000428912 797 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 RN7SL369P-201ENST00000477138 299 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 NATP-201ENST00000523491 878 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 OR8G3P-201ENST00000533406 921 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 RPA2P1-201ENST00000556557 721 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC139795.3-201ENST00000606358 541 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 SAMMSON-227ENST00000642114 1199 ntBASIC10.55□□□□□ -0.72
RIMBP3Q9UFD9 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 C3P1-202ENST00000497718 4954 ntBASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AL353795.3-201ENST00000624351 5702 ntBASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 RNFT1P3-201ENST00000340898 1052 ntBASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 TMEM75-201ENST00000624314 2165 ntBASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 APP-209ENST00000440126 2846 ntTSL 2 BASIC10.54□□□□□ -0.72
RIMBP3Q9UFD9 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 MIR1272-201ENST00000408106 129 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 PRDX1P1-201ENST00000449329 596 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 SIAH1P1-201ENST00000479411 923 ntBASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 PFN2-217ENST00000498307 556 ntTSL 4 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC10.53□□□□□ -0.72
RIMBP3Q9UFD9 RNA5SP434-201ENST00000516647 121 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms