Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SSX6-201ENST00000376932 562 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SNORA51.7-201ENST00000384171 134 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC113608.1-201ENST00000398740 305 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 RNU4-64P-201ENST00000410795 131 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC009299.1-201ENST00000429684 717 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 ATP5G1P6-201ENST00000451206 412 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC013429.1-201ENST00000456604 422 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC008967.1-201ENST00000504843 163 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 OR5AH1P-201ENST00000595968 283 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AL390058.1-201ENST00000603834 629 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC007262.1-201ENST00000604099 321 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC026333.4-201ENST00000613543 544 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC004943.1-203ENST00000624370 1074 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 CUBNP3-201ENST00000457461 1784 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 AC022034.1-201ENST00000512867 2156 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 SOCS5P5-201ENST00000402732 1586 ntBASIC6.48□□□□□ -1.37
CCNB1IP1Q9NPC3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC078880.4-201ENST00000617627 1749 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 ABCA11P-202ENST00000504019 2110 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FOLH1B-202ENST00000529567 2145 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 RNA5SP238-201ENST00000365464 120 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC020983.1-201ENST00000417063 543 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC231533.2-201ENST00000419045 978 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 GTF2F2P2-201ENST00000445825 721 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC135721.2-201ENST00000464237 300 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL647P-201ENST00000485429 300 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 OR6M3P-201ENST00000531567 700 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AL591767.3-201ENST00000554632 525 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL42P-201ENST00000579786 294 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 RN7SL835P-201ENST00000579920 262 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC137695.1-201ENST00000604126 489 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FAM27E3-202ENST00000614611 340 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC106795.5-201ENST00000623288 454 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC022905.1-201ENST00000503430 3048 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AC013488.1-201ENST00000526618 1838 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms