Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 MTCO3P31-201ENST00000405526 789 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RN7SKP142-201ENST00000411236 328 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPS7P9-201ENST00000414704 586 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AL161742.1-201ENST00000418154 584 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 Z97055.1-201ENST00000419730 712 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPS10P2-201ENST00000430953 494 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 BX119904.1-201ENST00000432026 348 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 EFCAB14P1-201ENST00000442409 463 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AL445686.1-201ENST00000443086 348 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 YAP1P2-201ENST00000455104 610 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC005020.1-201ENST00000455459 526 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPL29P25-201ENST00000465069 850 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPL30P6-201ENST00000475925 342 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPS10P28-201ENST00000480396 498 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 RPL5P29-201ENST00000482972 894 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AL355076.1-201ENST00000484315 270 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC021006.1-201ENST00000489849 553 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 PFN2-213ENST00000494827 793 ntTSL 4 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 FAM92A1P2-202ENST00000504766 877 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 HMGB1P46-201ENST00000520062 610 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 BUD31P1-201ENST00000521828 359 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 OR7E154P-201ENST00000525174 932 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 OR5AM1P-201ENST00000532136 1032 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC079031.2-201ENST00000537742 615 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 MPPE1P1-201ENST00000557286 1076 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC010680.3-201ENST00000604215 520 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CDK2AP2P1-201ENST00000617479 328 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC009704.2-201ENST00000618739 483 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC004801.7-201ENST00000624535 2973 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 ELF2P3-201ENST00000445099 1506 ntBASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.19□□□□□ -1.1
CNTNAP3Q9BZ76 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 Y_RNA.472-201ENST00000384322 102 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 AL031577.2-201ENST00000404133 280 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 RN7SKP7-201ENST00000410540 285 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 RPL7L1P12-201ENST00000417594 729 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 FABP5P1-201ENST00000423401 411 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 AP003385.1-201ENST00000426387 893 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 AC000111.3-201ENST00000433478 193 ntBASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CNTNAP3Q9BZ76 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms