Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
CDC42BPAQ5VT25 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 BRD7P1-201ENST00000557705 1915 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 CYCSP17-201ENST00000407870 315 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 RN7SKP271-201ENST00000410528 320 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 CRYGGP-201ENST00000443337 145 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 RN7SL569P-201ENST00000494652 288 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 OR7E99P-201ENST00000505750 922 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AL109924.4-201ENST00000623089 670 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 AC022400.9-201ENST00000623633 273 ntBASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CDC42BPAQ5VT25 ERG-210ENST00000442448 5034 ntTSL 5 BASIC10.15□□□□□ -0.79
CDC42BPAQ5VT25 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC10.15□□□□□ -0.79
CDC42BPAQ5VT25 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 SPATA31D5P-201ENST00000376459 4784 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 RNA5SP65-201ENST00000363166 119 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 PNKDP1-201ENST00000435914 430 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 SULT1D1P-201ENST00000458020 882 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AL845552.1-201ENST00000556820 323 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AC124916.2-201ENST00000604416 224 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AC024884.1-201ENST00000620583 399 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 SNX18P12-201ENST00000624821 759 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 AC073488.9-201ENST00000631601 754 ntBASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42BPAQ5VT25 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 LYPLA1P3-201ENST00000402650 695 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 RANP6-201ENST00000413691 644 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL359092.1-201ENST00000417156 265 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 RN7SL369P-201ENST00000477138 299 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 CREM-242ENST00000490511 469 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL121583.1-201ENST00000612444 682 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 U1.41-201ENST00000617626 165 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 CTH-203ENST00000411986 2044 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 NRIR-201ENST00000366140 799 ntTSL 3 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 GCNT1P4-201ENST00000404096 329 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC069154.1-201ENST00000432914 542 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 OR52I1-201ENST00000450052 1050 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AC068228.1-201ENST00000461723 211 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL591767.3-201ENST00000554632 525 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL365223.1-201ENST00000574864 1297 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 AL356986.1-201ENST00000604085 341 ntBASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
CDC42BPAQ5VT25 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms