Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX4O60224 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SSX4O60224 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX4O60224 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSX4O60224 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 SNORA73B-201ENST00000363217 204 ntBASIC6.45□□□□□ -1.38
SSX4O60224 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX4O60224 AC113608.1-201ENST00000398740 305 ntBASIC6.45□□□□□ -1.38
SSX4O60224 RPSAP72-201ENST00000407020 358 ntBASIC6.45□□□□□ -1.38
SSX4O60224 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 RN7SKP232-201ENST00000410170 290 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 AC140479.1-201ENST00000440423 337 ntBASIC6.45□□□□□ -1.38
SSX4O60224 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 AC012493.1-201ENST00000453252 760 ntBASIC6.45□□□□□ -1.38
SSX4O60224 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSX4O60224 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 GAPDHP61-201ENST00000507324 1005 ntBASIC6.45□□□□□ -1.38
SSX4O60224 RNU6-964P-201ENST00000516524 69 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AP001636.1-201ENST00000531997 1122 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX4O60224 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AC108451.2-201ENST00000603875 538 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.45□□□□□ -1.38
SSX4O60224 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.45□□□□□ -1.38
SSX4O60224 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 AP001157.1-201ENST00000550837 2339 ntBASIC6.45□□□□□ -1.38
SSX4O60224 AC069222.1-201ENST00000608028 3360 ntBASIC6.45□□□□□ -1.38
SSX4O60224 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX4O60224 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSX4O60224 TRIM64EP-201ENST00000531233 1307 ntBASIC6.45□□□□□ -1.38
SSX4O60224 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
SSX4O60224 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX4O60224 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSX4O60224 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 AP003486.1-201ENST00000525716 3994 ntBASIC6.44□□□□□ -1.38
SSX4O60224 CDY5P-201ENST00000411487 1580 ntBASIC6.44□□□□□ -1.38
SSX4O60224 CDY9P-201ENST00000451397 1580 ntBASIC6.44□□□□□ -1.38
SSX4O60224 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX4O60224 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.44□□□□□ -1.38
SSX4O60224 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX4O60224 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 RNA5SP35-201ENST00000391257 129 ntBASIC6.44□□□□□ -1.38
SSX4O60224 CNN3P1-201ENST00000401596 935 ntBASIC6.44□□□□□ -1.38
SSX4O60224 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 SNX18P3-201ENST00000424993 835 ntBASIC6.44□□□□□ -1.38
SSX4O60224 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 AC105052.2-201ENST00000434317 794 ntBASIC6.44□□□□□ -1.38
SSX4O60224 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX4O60224 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 RPS4XP19-201ENST00000460237 736 ntBASIC6.44□□□□□ -1.38
SSX4O60224 AC008620.1-201ENST00000468453 592 ntBASIC6.44□□□□□ -1.38
SSX4O60224 RN7SL233P-201ENST00000469988 277 ntBASIC6.44□□□□□ -1.38
SSX4O60224 MTCO1P55-201ENST00000489829 745 ntBASIC6.44□□□□□ -1.38
SSX4O60224 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 AC008629.3-201ENST00000505786 586 ntBASIC6.44□□□□□ -1.38
SSX4O60224 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 RNA5SP96-201ENST00000516041 107 ntBASIC6.44□□□□□ -1.38
SSX4O60224 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms