Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.22□□□□□ -0.776e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-207ENST00000449571 612 ntTSL 59.2□□□□□ -0.946e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-210ENST00000452438 563 ntTSL 48.87□□□□□ -0.996e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-213ENST00000472509 2551 ntTSL 1 (best) BASIC8.72□□□□□ -1.016e-6■□□□□ 10.5
PRPF8Q6P2Q9 ELL2-204ENST00000508694 743 ntTSL 5-0.59□□□□□ -2.52e-11■□□□□ 10.5
PRPF8Q6P2Q9 VWCE-203ENST00000398808 717 ntTSL 313.71□□□□□ -0.214e-11■□□□□ 10.5
PRPF8Q6P2Q9 DDX3Y-204ENST00000454054 1049 ntTSL 34.41□□□□□ -1.72e-6■□□□□ 10.5
PRPF8Q6P2Q9 DDX3Y-208ENST00000493363 528 ntTSL 21.69□□□□□ -2.142e-6■□□□□ 10.5
PRPF8Q6P2Q9 TPD52L2-208ENST00000474176 4053 ntTSL 28.86□□□□□ -0.992e-8■□□□□ 10.5
PRPF8Q6P2Q9 CS-232ENST00000552331 526 ntTSL 21.39□□□□□ -2.191e-7■□□□□ 10.5
PRPF8Q6P2Q9 TNNT1-216ENST00000593046 800 ntTSL 211.76□□□□□ -0.531e-6■□□□□ 10.5
PRPF8Q6P2Q9 TNNT1-213ENST00000589226 604 ntTSL 211.63□□□□□ -0.551e-6■□□□□ 10.5
PRPF8Q6P2Q9 TNNT1-215ENST00000592920 583 ntTSL 511.33□□□□□ -0.61e-6■□□□□ 10.5
PRPF8Q6P2Q9 TNNT1-210ENST00000588147 489 ntTSL 1 (best)11.31□□□□□ -0.61e-6■□□□□ 10.5
PRPF8Q6P2Q9 TNNT1-205ENST00000586282 327 ntTSL 54.09□□□□□ -1.761e-6■□□□□ 10.5
PRPF8Q6P2Q9 ENO1-203ENST00000486051 536 ntTSL 35.74□□□□□ -1.492e-16■□□□□ 10.5
PRPF8Q6P2Q9 TLN1-202ENST00000378192 1693 ntTSL 29.65□□□□□ -0.861e-6■□□□□ 10.5
PRPF8Q6P2Q9 PNPLA6-212ENST00000595352 563 ntTSL 310.53□□□□□ -0.722e-6■□□□□ 10.5
PRPF8Q6P2Q9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-6■□□□□ 10.5
PRPF8Q6P2Q9 KCNN4-205ENST00000599720 983 ntTSL 514.81□□□□□ -0.043e-6■□□□□ 10.5
PRPF8Q6P2Q9 KCNN4-208ENST00000601549 1093 ntTSL 314.73□□□□□ -0.053e-6■□□□□ 10.5
PRPF8Q6P2Q9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.32□□□□□ -0.123e-6■□□□□ 10.5
PRPF8Q6P2Q9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.291e-9■□□□□ 10.5
PRPF8Q6P2Q9 HMGCR-211ENST00000512053 465 ntTSL 26.08□□□□□ -1.442e-9■□□□□ 10.5
PRPF8Q6P2Q9 CPSF1-204ENST00000529288 588 ntTSL 211.02□□□□□ -0.644e-9■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-207ENST00000537275 1508 ntTSL 1 (best)19.92■□□□□ 0.786e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)19.92■□□□□ 0.786e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.786e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.72■□□□□ 0.756e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.536e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.78■□□□□ 0.446e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.386e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-211ENST00000545998 1584 ntTSL 1 (best)17.21■□□□□ 0.356e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.486e-13■□□□□ 10.5
PRPF8Q6P2Q9 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.666e-13■□□□□ 10.5
PRPF8Q6P2Q9 CLK1-211ENST00000481641 690 ntTSL 415.99■□□□□ 0.158e-7■□□□□ 10.5
PRPF8Q6P2Q9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.61■□□□□ 0.093e-9■□□□□ 10.5
PRPF8Q6P2Q9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.043e-9■□□□□ 10.5
PRPF8Q6P2Q9 GGT7-204ENST00000470952 427 ntTSL 513.08□□□□□ -0.322e-6■□□□□ 10.5
PRPF8Q6P2Q9 GGT7-203ENST00000469018 1064 ntTSL 512.22□□□□□ -0.452e-6■□□□□ 10.5
PRPF8Q6P2Q9 POMT1-202ENST00000372220 1741 ntTSL 515.1■□□□□ 0.012e-6■□□□□ 10.5
PRPF8Q6P2Q9 POMT1-215ENST00000485278 3420 ntTSL 28.93□□□□□ -0.982e-6■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-218ENST00000512888 851 ntTSL 220.24■□□□□ 0.832e-7■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.462e-7■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.122e-7■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.112e-7■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-206ENST00000503765 597 ntTSL 313.14□□□□□ -0.312e-7■□□□□ 10.5
PRPF8Q6P2Q9 CNOT3-206ENST00000471126 541 ntTSL 313.34□□□□□ -0.272e-13■□□□□ 10.5
PRPF8Q6P2Q9 ALDOA-215ENST00000565355 538 ntTSL 513.11□□□□□ -0.318e-12■□□□□ 10.5
PRPF8Q6P2Q9 EEF2-203ENST00000596417 218 ntTSL 28.28□□□□□ -1.081e-9■□□□□ 10.5
PRPF8Q6P2Q9 MPHOSPH10-202ENST00000468427 483 ntTSL 411.76□□□□□ -0.532e-8■□□□□ 10.5
PRPF8Q6P2Q9 MAU2-206ENST00000587362 557 ntTSL 45.25□□□□□ -1.571e-7■□□□□ 10.5
PRPF8Q6P2Q9 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.556e-7■□□□□ 10.5
PRPF8Q6P2Q9 RBBP6-208ENST00000564726 514 ntTSL 3-0.7□□□□□ -2.522e-7■□□□□ 10.5
PRPF8Q6P2Q9 YIPF3-210ENST00000502714 795 ntTSL 49.87□□□□□ -0.833e-8■□□□□ 10.5
PRPF8Q6P2Q9 PPAN-203ENST00000430370 594 ntTSL 310.53□□□□□ -0.721e-6■□□□□ 10.4
PRPF8Q6P2Q9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.52■□□□□ 0.42e-8■□□□□ 10.4
PRPF8Q6P2Q9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.152e-8■□□□□ 10.4
PRPF8Q6P2Q9 DGCR6L-203ENST00000443409 935 ntTSL 1 (best)13.97□□□□□ -0.172e-8■□□□□ 10.4
PRPF8Q6P2Q9 EXOC7-215ENST00000494787 542 ntTSL 212.51□□□□□ -0.411e-9■□□□□ 10.4
PRPF8Q6P2Q9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.264e-8■□□□□ 10.4
PRPF8Q6P2Q9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.334e-8■□□□□ 10.4
PRPF8Q6P2Q9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.464e-8■□□□□ 10.4
PRPF8Q6P2Q9 PIK3CB-202ENST00000461451 667 ntTSL 220.55■□□□□ 0.881e-8■□□□□ 10.4
PRPF8Q6P2Q9 PIK3CB-210ENST00000483968 721 ntTSL 319.53■□□□□ 0.721e-8■□□□□ 10.4
PRPF8Q6P2Q9 GMDS-203ENST00000467288 900 ntTSL 516.5■□□□□ 0.232e-14■□□□□ 10.4
PRPF8Q6P2Q9 GMDS-204ENST00000476972 591 ntTSL 216.34■□□□□ 0.212e-14■□□□□ 10.4
PRPF8Q6P2Q9 GMDS-205ENST00000486793 567 ntTSL 316.34■□□□□ 0.212e-14■□□□□ 10.4
PRPF8Q6P2Q9 AP1M2-203ENST00000589348 510 ntTSL 316.12■□□□□ 0.171e-8■□□□□ 10.4
PRPF8Q6P2Q9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.081e-8■□□□□ 10.4
PRPF8Q6P2Q9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.46□□□□□ -0.11e-8■□□□□ 10.4
PRPF8Q6P2Q9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.161e-8■□□□□ 10.4
PRPF8Q6P2Q9 AP1M2-210ENST00000592285 336 ntTSL 313.23□□□□□ -0.291e-8■□□□□ 10.4
PRPF8Q6P2Q9 UXS1-210ENST00000473338 1547 ntTSL 1 (best)12.3□□□□□ -0.441e-8■□□□□ 10.4
PRPF8Q6P2Q9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.451e-8■□□□□ 10.4
PRPF8Q6P2Q9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.551e-8■□□□□ 10.4
PRPF8Q6P2Q9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.581e-8■□□□□ 10.4
PRPF8Q6P2Q9 AP1M2-202ENST00000587069 544 ntTSL 211.15□□□□□ -0.621e-8■□□□□ 10.4
PRPF8Q6P2Q9 HRAS-209ENST00000479482 485 ntTSL 210.51□□□□□ -0.731e-8■□□□□ 10.4
PRPF8Q6P2Q9 ZFYVE27-211ENST00000481956 484 ntTSL 39.76□□□□□ -0.851e-8■□□□□ 10.4
PRPF8Q6P2Q9 ATP1B1-203ENST00000494797 718 ntTSL 29.59□□□□□ -0.872e-14■□□□□ 10.4
PRPF8Q6P2Q9 FHOD1-208ENST00000568595 520 ntTSL 49.51□□□□□ -0.891e-8■□□□□ 10.4
PRPF8Q6P2Q9 PALB2-202ENST00000561514 815 ntTSL 57.4□□□□□ -1.221e-8■□□□□ 10.4
PRPF8Q6P2Q9 ANKMY1-211ENST00000407275 252 ntTSL 37.28□□□□□ -1.241e-8■□□□□ 10.4
PRPF8Q6P2Q9 KHSRP-208ENST00000597656 328 ntTSL 56.84□□□□□ -1.312e-14■□□□□ 10.4
PRPF8Q6P2Q9 UXS1-215ENST00000497604 2907 ntTSL 25.48□□□□□ -1.531e-8■□□□□ 10.4
PRPF8Q6P2Q9 ATP5J2-210ENST00000491560 658 ntTSL 24.52□□□□□ -1.691e-6■□□□□ 10.4
PRPF8Q6P2Q9 DOCK5-204ENST00000463457 459 ntTSL 54.43□□□□□ -1.71e-8■□□□□ 10.4
PRPF8Q6P2Q9 WDR48-209ENST00000477197 574 ntTSL 42.14□□□□□ -2.071e-8■□□□□ 10.4
PRPF8Q6P2Q9 CANX-211ENST00000506298 549 ntTSL 21.02□□□□□ -2.252e-14■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-204ENST00000535542 951 ntTSL 317.72■□□□□ 0.433e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.013e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-215ENST00000543562 444 ntTSL 1 (best)13.41□□□□□ -0.263e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.17□□□□□ -0.33e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.03□□□□□ -0.483e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.543e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.583e-6■□□□□ 10.4
PRPF8Q6P2Q9 ORAOV1-203ENST00000441922 359 ntTSL 1 (best)8.84□□□□□ -0.993e-6■□□□□ 10.4
PRPF8Q6P2Q9 USPL1-202ENST00000465952 1133 ntTSL 214.57□□□□□ -0.082e-6■□□□□ 10.4
PRPF8Q6P2Q9 STK25-210ENST00000426941 575 ntTSL 219.39■□□□□ 0.694e-12■□□□□ 10.4
Retrieved 100 of 73,762 protein–RNA pairs in 701.7 ms