RNA–Protein interactions for RNA: ENST00000477197.1

WDR48-209, Transcript of WD repeat domain 48, humanhuman

TSL 4

Gene WDR48, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-209ENST00000477197 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
WDR48-209ENST00000477197 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
WDR48-209ENST00000477197 PHF23Q9BUL5 403 aaPredicted RBP21.29■■□□□ 1
WDR48-209ENST00000477197 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
WDR48-209ENST00000477197 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
WDR48-209ENST00000477197 FOXD1Q16676 465 aa19.12■□□□□ 0.65
WDR48-209ENST00000477197 PPP6R1Q9UPN7 881 aa18.66■□□□□ 0.58
WDR48-209ENST00000477197 ADRA2BP18089 450 aa18.62■□□□□ 0.57
WDR48-209ENST00000477197 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
WDR48-209ENST00000477197 MSH5O43196 834 aa17.49■□□□□ 0.39
WDR48-209ENST00000477197 KCNA4P22459 653 aa17.4■□□□□ 0.38
WDR48-209ENST00000477197 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
WDR48-209ENST00000477197 NCBP3Q53F19 620 aaKnown RBP17■□□□□ 0.31
WDR48-209ENST00000477197 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
WDR48-209ENST00000477197 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
WDR48-209ENST00000477197 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
WDR48-209ENST00000477197 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
WDR48-209ENST00000477197 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
WDR48-209ENST00000477197 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
WDR48-209ENST00000477197 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
WDR48-209ENST00000477197 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
WDR48-209ENST00000477197 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
WDR48-209ENST00000477197 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
WDR48-209ENST00000477197 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
WDR48-209ENST00000477197 ZBTB22O15209 634 aa16.07■□□□□ 0.16
WDR48-209ENST00000477197 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
WDR48-209ENST00000477197 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
WDR48-209ENST00000477197 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
WDR48-209ENST00000477197 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.08
WDR48-209ENST00000477197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
WDR48-209ENST00000477197 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
WDR48-209ENST00000477197 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
WDR48-209ENST00000477197 ATXN8OSP0DMR3 200 aa15.33■□□□□ 0.04
WDR48-209ENST00000477197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
WDR48-209ENST00000477197 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
WDR48-209ENST00000477197 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
WDR48-209ENST00000477197 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
WDR48-209ENST00000477197 RNF39Q9H2S5 420 aa15.06■□□□□ 0
WDR48-209ENST00000477197 APLP2Q06481 763 aa14.94□□□□□ -0.02
WDR48-209ENST00000477197 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
WDR48-209ENST00000477197 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
WDR48-209ENST00000477197 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
WDR48-209ENST00000477197 CAPN15O75808 1086 aa14.65□□□□□ -0.06
WDR48-209ENST00000477197 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
WDR48-209ENST00000477197 FKBP8Q14318 412 aa14.56□□□□□ -0.08
WDR48-209ENST00000477197 POLA2Q14181 598 aa14.53□□□□□ -0.08
WDR48-209ENST00000477197 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
WDR48-209ENST00000477197 ABCB7O75027 752 aa14.43□□□□□ -0.1
WDR48-209ENST00000477197 DSG3P32926 999 aa14.42□□□□□ -0.1
WDR48-209ENST00000477197 FBLN2P98095 1184 aa14.37□□□□□ -0.11
WDR48-209ENST00000477197 ZBTB12Q9Y330 459 aaPredicted RBP14.33□□□□□ -0.12
WDR48-209ENST00000477197 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
WDR48-209ENST00000477197 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
WDR48-209ENST00000477197 PROM2Q8N271 834 aa14.19□□□□□ -0.14
WDR48-209ENST00000477197 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
WDR48-209ENST00000477197 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
WDR48-209ENST00000477197 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
WDR48-209ENST00000477197 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
WDR48-209ENST00000477197 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
WDR48-209ENST00000477197 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
WDR48-209ENST00000477197 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
WDR48-209ENST00000477197 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
WDR48-209ENST00000477197 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
WDR48-209ENST00000477197 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
WDR48-209ENST00000477197 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
WDR48-209ENST00000477197 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
WDR48-209ENST00000477197 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
WDR48-209ENST00000477197 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
WDR48-209ENST00000477197 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
WDR48-209ENST00000477197 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
WDR48-209ENST00000477197 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
WDR48-209ENST00000477197 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
WDR48-209ENST00000477197 MIER1Q8N108 512 aa13.41□□□□□ -0.26
WDR48-209ENST00000477197 SPOCK2Q92563 424 aa13.37□□□□□ -0.27
WDR48-209ENST00000477197 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
WDR48-209ENST00000477197 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
WDR48-209ENST00000477197 PKD2Q13563 968 aa13.33□□□□□ -0.28
WDR48-209ENST00000477197 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
WDR48-209ENST00000477197 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
WDR48-209ENST00000477197 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
WDR48-209ENST00000477197 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
WDR48-209ENST00000477197 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
WDR48-209ENST00000477197 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
WDR48-209ENST00000477197 NUBP1P53384 320 aa13.14□□□□□ -0.31
WDR48-209ENST00000477197 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
WDR48-209ENST00000477197 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
WDR48-209ENST00000477197 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
WDR48-209ENST00000477197 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
WDR48-209ENST00000477197 GSE1Q14687 1217 aa13.02□□□□□ -0.33
WDR48-209ENST00000477197 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
WDR48-209ENST00000477197 RGL2O15211 777 aa13.01□□□□□ -0.33
WDR48-209ENST00000477197 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
WDR48-209ENST00000477197 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
WDR48-209ENST00000477197 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
WDR48-209ENST00000477197 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
WDR48-209ENST00000477197 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
WDR48-209ENST00000477197 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
WDR48-209ENST00000477197 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
WDR48-209ENST00000477197 FARP1Q9Y4F1 1045 aaPredicted RBP12.96□□□□□ -0.33
WDR48-209ENST00000477197 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms