Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 COL6A4P1-202ENST00000487147 4317 ntBASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
FOXR1Q6PIV2 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC010886.1-201ENST00000437380 2869 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RNA5SP71-201ENST00000362967 126 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RNU6-618P-201ENST00000363518 112 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RNU6-1011P-201ENST00000384668 107 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 LDHAP4-201ENST00000397561 998 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 FTH1P10-201ENST00000401830 930 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 VN1R13P-201ENST00000406212 885 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL158050.1-201ENST00000416077 457 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL513175.2-201ENST00000422071 443 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC114492.1-201ENST00000434936 454 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 Z74696.2-201ENST00000436514 498 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ARF4P4-201ENST00000439608 520 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ELOCP10-201ENST00000440624 327 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 OR5S1P-201ENST00000453063 951 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL133477.1-201ENST00000457472 514 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RN7SL368P-201ENST00000473384 277 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC068724.1-201ENST00000487100 792 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RPL9P15-201ENST00000491096 532 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RN7SL434P-201ENST00000495872 271 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AF186996.2-201ENST00000508347 907 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC109471.1-201ENST00000511631 612 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC092593.2-201ENST00000513866 913 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RNA5SP101-201ENST00000517036 108 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 OR56A7P-201ENST00000524865 941 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 OR4A43P-201ENST00000532938 908 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC092851.1-201ENST00000535964 478 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC135626.1-201ENST00000556983 435 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC091304.4-201ENST00000565703 620 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC022069.1-201ENST00000582910 658 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC107993.1-201ENST00000591343 684 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 OR7A11P-201ENST00000597719 953 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ELOCP34-201ENST00000604436 327 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 Z82195.1-201ENST00000604558 398 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL031601.1-201ENST00000605702 394 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL450489.1-201ENST00000612071 468 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL158063.1-201ENST00000615349 536 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AL731556.2-201ENST00000615610 770 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC138932.5-201ENST00000617759 563 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 MITF-202ENST00000314589 1993 ntTSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 TTC3P1-201ENST00000399586 6081 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RPS4XP5-202ENST00000449995 1334 ntBASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
FOXR1Q6PIV2 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms