Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RANP6-201ENST00000413691 644 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 RPL5P34-201ENST00000426545 891 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AC104843.2-201ENST00000427666 297 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AL121916.1-201ENST00000429405 308 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 HMGN1P6-201ENST00000438508 291 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.11□□□□□ -1.11
COL4A5P29400 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 HLA-DPA3-207ENST00000454398 229 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.11□□□□□ -1.11
COL4A5P29400 SCARNA5-201ENST00000516201 276 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC002519.2-203ENST00000567043 837 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 AC139795.3-201ENST00000606358 541 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 AC024884.1-201ENST00000620583 399 ntBASIC8.11□□□□□ -1.11
COL4A5P29400 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.11□□□□□ -1.11
COL4A5P29400 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.11□□□□□ -1.11
COL4A5P29400 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
COL4A5P29400 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 AC005614.1-201ENST00000598952 3653 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 UBTFL11-201ENST00000428234 2252 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 RN7SKP62-201ENST00000384539 329 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 RN7SKP229-201ENST00000410465 302 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 GSTA6P-201ENST00000424144 582 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 PMS2P9-201ENST00000441237 515 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 RN7SL254P-201ENST00000460609 284 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 RPL7P51-201ENST00000490532 749 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC010463.3-201ENST00000594077 500 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 AL080312.2-201ENST00000613001 630 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 AP001264.1-201ENST00000620602 703 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC016251.1-201ENST00000624299 4198 ntBASIC8.1□□□□□ -1.11
COL4A5P29400 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.1□□□□□ -1.11
COL4A5P29400 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
COL4A5P29400 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
COL4A5P29400 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 AP000766.1-201ENST00000561746 4140 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 AC004386.1-201ENST00000393214 761 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 RPS3P2-201ENST00000421346 701 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.09□□□□□ -1.11
COL4A5P29400 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.09□□□□□ -1.11
COL4A5P29400 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.09□□□□□ -1.11
COL4A5P29400 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.09□□□□□ -1.11
COL4A5P29400 RN7SL284P-201ENST00000498823 275 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.09□□□□□ -1.11
COL4A5P29400 RPL3P13-201ENST00000550415 216 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 LINC00556-201ENST00000569603 412 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 SYPL1P2-201ENST00000582878 727 ntBASIC8.09□□□□□ -1.11
COL4A5P29400 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 OSTC-205ENST00000613215 876 ntTSL 2 BASIC8.09□□□□□ -1.11
COL4A5P29400 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
COL4A5P29400 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
COL4A5P29400 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
COL4A5P29400 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms