Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
POLR2AP24928 RN7SKP47-201ENST00000365347 328 ntBASIC8.04□□□□□ -1.12
POLR2AP24928 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC8.04□□□□□ -1.12
POLR2AP24928 DNAJA1P5-201ENST00000440278 943 ntBASIC8.04□□□□□ -1.12
POLR2AP24928 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.04□□□□□ -1.12
POLR2AP24928 AC104109.1-201ENST00000498563 436 ntBASIC8.04□□□□□ -1.12
POLR2AP24928 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.04□□□□□ -1.12
POLR2AP24928 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.04□□□□□ -1.12
POLR2AP24928 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.04□□□□□ -1.12
POLR2AP24928 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.04□□□□□ -1.12
POLR2AP24928 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.04□□□□□ -1.12
POLR2AP24928 ACTG1P15-201ENST00000570019 1063 ntBASIC8.04□□□□□ -1.12
POLR2AP24928 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.04□□□□□ -1.12
POLR2AP24928 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.04□□□□□ -1.12
POLR2AP24928 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.04□□□□□ -1.12
POLR2AP24928 AL109924.4-201ENST00000623089 670 ntBASIC8.04□□□□□ -1.12
POLR2AP24928 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
POLR2AP24928 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
POLR2AP24928 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
POLR2AP24928 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
POLR2AP24928 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.04□□□□□ -1.12
POLR2AP24928 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
POLR2AP24928 AL451064.2-201ENST00000623514 1654 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
POLR2AP24928 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.03□□□□□ -1.12
POLR2AP24928 PSMC1P4-201ENST00000515236 1327 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.03□□□□□ -1.12
POLR2AP24928 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.03□□□□□ -1.12
POLR2AP24928 RN7SKP229-201ENST00000410465 302 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.03□□□□□ -1.12
POLR2AP24928 DHFRP2-201ENST00000414224 547 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 LSM3P3-201ENST00000436601 306 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.03□□□□□ -1.12
POLR2AP24928 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.03□□□□□ -1.12
POLR2AP24928 RN7SL177P-201ENST00000476596 299 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 RN7SL101P-201ENST00000496350 279 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 COX6B1P4-201ENST00000519826 484 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.03□□□□□ -1.12
POLR2AP24928 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.03□□□□□ -1.12
POLR2AP24928 AL590032.1-201ENST00000604920 252 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC8.03□□□□□ -1.12
POLR2AP24928 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
POLR2AP24928 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
POLR2AP24928 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.03□□□□□ -1.12
POLR2AP24928 AC005702.3-201ENST00000585345 1447 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.03□□□□□ -1.12
POLR2AP24928 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 LYARP1-201ENST00000436977 1501 ntBASIC8.03□□□□□ -1.12
POLR2AP24928 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
POLR2AP24928 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
POLR2AP24928 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 TRIM60P19-201ENST00000452879 1462 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 AL031985.1-201ENST00000392713 418 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.02□□□□□ -1.12
POLR2AP24928 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC8.02□□□□□ -1.12
POLR2AP24928 BTG3P1-201ENST00000435859 716 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 SNRPBP1-201ENST00000443634 282 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
POLR2AP24928 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
POLR2AP24928 RN7SL187P-201ENST00000495587 303 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.02□□□□□ -1.12
POLR2AP24928 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.02□□□□□ -1.12
POLR2AP24928 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 UBE2CP1-201ENST00000557130 554 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 MIR4502-201ENST00000580432 81 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 AC004805.3-201ENST00000603178 310 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 AP000240.1-201ENST00000609910 452 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 OSTC-205ENST00000613215 876 ntTSL 2 BASIC8.02□□□□□ -1.12
POLR2AP24928 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 AL596275.2-203ENST00000641951 371 ntBASIC8.02□□□□□ -1.12
POLR2AP24928 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
POLR2AP24928 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.12
POLR2AP24928 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.02□□□□□ -1.12
POLR2AP24928 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
POLR2AP24928 AOX2P-204ENST00000487742 3284 ntBASIC8.02□□□□□ -1.13
POLR2AP24928 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms