Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 RNA5SP474-201ENST00000391234 90 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AL136100.1-201ENST00000407696 330 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 WDR82P2-201ENST00000444540 928 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 MRPL57P6-201ENST00000506570 309 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AC026774.2-201ENST00000513990 1098 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 IGHVIII-13-1-201ENST00000517613 291 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AC074141.1-201ENST00000588129 2995 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS8Q8N3P4 HNRNPA3P9-201ENST00000604913 979 ntBASIC10.71□□□□□ -0.69
VPS8Q8N3P4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 ENO1P4-201ENST00000416471 1785 ntBASIC10.71□□□□□ -0.7
VPS8Q8N3P4 IPO7P2-201ENST00000451446 1750 ntBASIC10.71□□□□□ -0.7
VPS8Q8N3P4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS8Q8N3P4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC124045.1-201ENST00000606008 1953 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 RNU1-55P-201ENST00000365510 158 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 MIR551B-201ENST00000384984 96 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 UBBP1-201ENST00000392399 473 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC064862.5-201ENST00000440618 334 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 UBQLN1P1-207ENST00000441056 1169 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 GAPDHP20-201ENST00000444107 1007 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AP003385.3-201ENST00000472498 287 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC106800.2-201ENST00000514009 1103 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 RN7SKP196-201ENST00000516267 345 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC015819.1-201ENST00000613588 663 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC004023.1-201ENST00000561473 1744 ntBASIC10.7□□□□□ -0.7
VPS8Q8N3P4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS8Q8N3P4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 SNORA7A-201ENST00000384765 139 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 AC091390.2-201ENST00000432573 374 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 RPL26P30-201ENST00000453533 435 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 NACAP5-201ENST00000509863 636 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 MIR3157-201ENST00000578688 85 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 AL008582.1-201ENST00000609612 442 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 AC026951.2-201ENST00000613847 241 ntBASIC10.69□□□□□ -0.7
VPS8Q8N3P4 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS8Q8N3P4 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 RNA5SP308-201ENST00000362532 115 ntBASIC10.68□□□□□ -0.7
VPS8Q8N3P4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VPS8Q8N3P4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms