Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDS5AQ29RF7 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC020978.6-201ENST00000571197 3177 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC019178.1-201ENST00000392337 440 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC244452.1-201ENST00000413798 141 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC000089.1-201ENST00000424559 801 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC083855.1-201ENST00000440041 258 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AL121578.2-201ENST00000448797 447 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC083806.1-201ENST00000468934 316 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 RPS10P20-201ENST00000494130 463 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC139713.1-202ENST00000512366 460 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 PPIAP14-201ENST00000577627 496 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 OR4C1P-202ENST00000641065 1569 ntBASIC8.37□□□□□ -1.07
PDS5AQ29RF7 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDS5AQ29RF7 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC006058.1-201ENST00000568686 5067 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC004023.1-201ENST00000561473 1744 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 RN7SKP47-201ENST00000365347 328 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 CDC42P6-201ENST00000421246 576 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 FTH1P10-202ENST00000430907 550 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 RN7SL502P-201ENST00000481857 290 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 SETP17-201ENST00000534163 817 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AC048341.3-201ENST00000619323 491 ntBASIC8.36□□□□□ -1.07
PDS5AQ29RF7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDS5AQ29RF7 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AL445991.1-201ENST00000450381 475 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC135721.2-201ENST00000464237 300 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC010442.1-201ENST00000515583 816 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.35□□□□□ -1.07
PDS5AQ29RF7 AC084851.2-201ENST00000530377 364 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 OR4A21P-201ENST00000532759 944 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 FXNP1-201ENST00000555153 337 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 BMS1P16-201ENST00000556075 1147 ntBASIC8.35□□□□□ -1.07
PDS5AQ29RF7 OR4C49P-201ENST00000563891 900 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms