Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SNORA70.3-201ENST00000365075 132 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SCARNA5-201ENST00000516201 276 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AP002833.3-201ENST00000625075 2265 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 ARHGAP42P5-201ENST00000548856 2936 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SNORA38B-201ENST00000363524 131 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 RNU6-1017P-201ENST00000363613 106 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AL590143.1-201ENST00000405071 138 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 RN7SL329P-201ENST00000467740 299 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC066616.1-201ENST00000486795 413 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 CTSLP2-201ENST00000580501 394 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 RPS11-202ENST00000594493 575 ntTSL 3 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 MIR6820-201ENST00000611508 62 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 AL137246.2-201ENST00000613439 662 ntBASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
RIMBP3Q9UFD9 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 CD302-202ENST00000429078 3803 ntTSL 2 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AL451064.2-201ENST00000623514 1654 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 HMGB1P32-201ENST00000425971 565 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 HNRNPA1P18-201ENST00000433537 927 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 EMC3-AS1-205ENST00000438698 534 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AP006222.1-205ENST00000450734 457 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 RNA5SP228-201ENST00000516232 133 ntBASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 PVT1-214ENST00000522875 922 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC10.65□□□□□ -0.7
RIMBP3Q9UFD9 AC124045.1-201ENST00000606008 1953 ntBASIC10.65□□□□□ -0.71
RIMBP3Q9UFD9 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
RIMBP3Q9UFD9 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
RIMBP3Q9UFD9 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC10.65□□□□□ -0.71
RIMBP3Q9UFD9 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC10.65□□□□□ -0.71
RIMBP3Q9UFD9 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AC026951.1-201ENST00000559530 2459 ntBASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AC017035.1-201ENST00000411999 1115 ntBASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 RAC1P4-201ENST00000419413 579 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms