Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC008507.5-201ENST00000624591 1969 ntBASIC9.42□□□□□ -0.9
LRCH3Q96II8 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRCH3Q96II8 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC9.42□□□□□ -0.9
LRCH3Q96II8 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRCH3Q96II8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
LRCH3Q96II8 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC9.42□□□□□ -0.9
LRCH3Q96II8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC9.42□□□□□ -0.9
LRCH3Q96II8 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRCH3Q96II8 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRCH3Q96II8 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC107959.2-201ENST00000501897 2636 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 ST7-213ENST00000432298 1956 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 U3.1-201ENST00000362500 215 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 RNY3P10-201ENST00000384764 102 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 RPL7L1P12-201ENST00000417594 729 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 Z99497.1-201ENST00000421282 135 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL138479.1-201ENST00000426913 484 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 YWHAZP2-201ENST00000440317 728 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 SNX18P9-201ENST00000440580 835 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 USP9YP15-201ENST00000442391 422 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL158214.1-201ENST00000444423 404 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 SSXP1-201ENST00000453640 473 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC146507.1-201ENST00000468335 354 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 RN7SL403P-201ENST00000481783 305 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC013828.1-201ENST00000481845 158 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 RN7SL135P-201ENST00000490144 278 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC091805.1-201ENST00000498395 342 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 WBP1LP2-201ENST00000515260 998 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 RNU6-678P-201ENST00000516832 109 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 GZMB-205ENST00000526004 819 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 DEFB130C-202ENST00000530001 230 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 RN7SL689P-201ENST00000577215 297 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 MIR3668-201ENST00000582138 75 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 RN7SL622P-201ENST00000585292 275 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC005261.5-201ENST00000596280 355 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL451054.3-201ENST00000611115 776 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 FAM30B-201ENST00000611556 397 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL109614.1-201ENST00000620327 419 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 FAM157B-203ENST00000639350 358 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL158071.4-201ENST00000608358 4125 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AC110048.2-201ENST00000617013 6721 ntBASIC9.41□□□□□ -0.9
LRCH3Q96II8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRCH3Q96II8 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LRCH3Q96II8 AL353625.1-201ENST00000569097 3131 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC091962.1-201ENST00000561496 1765 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 Y_RNA.295-201ENST00000364918 102 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 SNORA73A-201ENST00000364938 206 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms