Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SLC1A1P43005 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 RPL9P21-201ENST00000392269 505 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC090114.1-201ENST00000393266 448 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 MIR541-201ENST00000401360 84 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.35□□□□□ -1.23
SLC1A1P43005 FABP5P1-201ENST00000423401 411 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 FABP5P2-201ENST00000439042 408 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 RPL21P33-201ENST00000444831 484 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 RPL34P34-201ENST00000465389 354 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC096754.1-201ENST00000508904 818 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AL049869.4-201ENST00000555669 178 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AC061975.3-201ENST00000583209 244 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 AC006116.6-201ENST00000593258 1103 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SLC1A1P43005 AP002345.2-201ENST00000609961 904 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SLC1A1P43005 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.35□□□□□ -1.23
SLC1A1P43005 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.35□□□□□ -1.23
SLC1A1P43005 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SLC1A1P43005 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SLC1A1P43005 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.35□□□□□ -1.23
SLC1A1P43005 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SLC1A1P43005 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SLC1A1P43005 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SLC1A1P43005 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.34□□□□□ -1.23
SLC1A1P43005 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC119674.1-204ENST00000641348 1343 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SLC1A1P43005 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.34□□□□□ -1.23
SLC1A1P43005 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.34□□□□□ -1.23
SLC1A1P43005 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.34□□□□□ -1.23
SLC1A1P43005 LSM3P3-201ENST00000436601 306 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC004692.1-201ENST00000455430 424 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 PSMA6P2-201ENST00000457574 686 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 AC008620.1-201ENST00000468453 592 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 RN7SL647P-201ENST00000485429 300 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 RN7SL182P-201ENST00000496499 300 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 RN7SKP98-201ENST00000517070 156 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SLC1A1P43005 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
SLC1A1P43005 RN7SL42P-201ENST00000579786 294 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.34□□□□□ -1.23
SLC1A1P43005 OR7A1P-201ENST00000601206 970 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.34□□□□□ -1.23
SLC1A1P43005 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC011471.4-201ENST00000638271 216 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 AL354702.2-202ENST00000641481 890 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 AC129502.1-201ENST00000623261 1654 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 AL359263.1-201ENST00000441188 2796 ntBASIC7.34□□□□□ -1.23
SLC1A1P43005 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.34□□□□□ -1.23
SLC1A1P43005 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SLC1A1P43005 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SLC1A1P43005 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.34□□□□□ -1.24
SLC1A1P43005 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SLC1A1P43005 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.33□□□□□ -1.24
SLC1A1P43005 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SLC1A1P43005 AC007938.1-201ENST00000562524 2902 ntBASIC7.33□□□□□ -1.24
SLC1A1P43005 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms