Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC006512.2-201ENST00000543250 486 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.08□□□□□ -1.12
POLR2AP24928 AC004232.2-201ENST00000574245 821 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.08□□□□□ -1.12
POLR2AP24928 AL589743.6-201ENST00000611025 117 ntBASIC8.08□□□□□ -1.12
POLR2AP24928 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
POLR2AP24928 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
POLR2AP24928 AC104966.1-201ENST00000467010 1464 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.07□□□□□ -1.12
POLR2AP24928 AC129502.1-201ENST00000623261 1654 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 AC090983.1-201ENST00000623426 3897 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
POLR2AP24928 LCN1P2-201ENST00000372030 223 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
POLR2AP24928 HMGN1P20-201ENST00000411849 300 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 SEC63P1-201ENST00000425785 1258 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 HMGN1P6-201ENST00000438508 291 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC010240.2-201ENST00000445363 1205 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.07□□□□□ -1.12
POLR2AP24928 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.07□□□□□ -1.12
POLR2AP24928 AC110749.1-201ENST00000462007 357 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 AL390198.2-201ENST00000510553 222 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC8.07□□□□□ -1.12
POLR2AP24928 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 AC013283.1-201ENST00000557282 492 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 MIR4443-201ENST00000585052 53 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC8.07□□□□□ -1.12
POLR2AP24928 AC006328.2-201ENST00000623198 397 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AC012005.2-201ENST00000624333 397 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 AL354702.2-202ENST00000641481 890 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 AL354854.1-201ENST00000455940 1363 ntBASIC8.07□□□□□ -1.12
POLR2AP24928 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
POLR2AP24928 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.07□□□□□ -1.12
POLR2AP24928 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
POLR2AP24928 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.06□□□□□ -1.12
POLR2AP24928 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 CDY3P-201ENST00000454543 1618 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 OR5M2P-202ENST00000641241 4242 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 MAPK10-379ENST00000642013 1385 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 SNORA68-201ENST00000384437 133 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 AL354794.2-201ENST00000424795 1248 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AC099782.1-201ENST00000425889 474 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC068228.1-201ENST00000461723 211 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 AC009955.2-201ENST00000597288 542 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC073575.2-201ENST00000614212 627 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AL109620.1-201ENST00000618738 1197 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
POLR2AP24928 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.06□□□□□ -1.12
POLR2AP24928 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.06□□□□□ -1.12
POLR2AP24928 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.06□□□□□ -1.12
POLR2AP24928 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.06□□□□□ -1.12
POLR2AP24928 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
POLR2AP24928 RNA5SP172-201ENST00000365061 118 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 AC004386.1-201ENST00000393214 761 ntBASIC8.06□□□□□ -1.12
POLR2AP24928 PRDX1P1-201ENST00000449329 596 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms