Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPS4XP19-201ENST00000460237 736 ntBASIC7.46□□□□□ -1.22
APOEP02649 AC021074.2-201ENST00000468434 172 ntBASIC7.46□□□□□ -1.22
APOEP02649 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.46□□□□□ -1.22
APOEP02649 RN7SL776P-201ENST00000493390 268 ntBASIC7.46□□□□□ -1.22
APOEP02649 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.46□□□□□ -1.22
APOEP02649 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.46□□□□□ -1.22
APOEP02649 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.46□□□□□ -1.22
APOEP02649 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 AC023513.1-201ENST00000604396 691 ntBASIC7.46□□□□□ -1.22
APOEP02649 AP005329.3-201ENST00000609924 686 ntBASIC7.46□□□□□ -1.22
APOEP02649 AL121985.2-201ENST00000621192 555 ntBASIC7.46□□□□□ -1.22
APOEP02649 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.46□□□□□ -1.22
APOEP02649 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
APOEP02649 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
APOEP02649 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.46□□□□□ -1.22
APOEP02649 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 AC061975.5-201ENST00000584928 1441 ntBASIC7.45□□□□□ -1.22
APOEP02649 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.45□□□□□ -1.22
APOEP02649 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 SPATA31C2-201ENST00000324915 3777 ntBASIC7.45□□□□□ -1.22
APOEP02649 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
APOEP02649 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
APOEP02649 RNA5SP231-201ENST00000410496 138 ntBASIC7.45□□□□□ -1.22
APOEP02649 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.45□□□□□ -1.22
APOEP02649 AL359633.1-201ENST00000421403 310 ntBASIC7.45□□□□□ -1.22
APOEP02649 MORF4L1P5-201ENST00000433352 961 ntBASIC7.45□□□□□ -1.22
APOEP02649 RPL14P5-201ENST00000436474 730 ntBASIC7.45□□□□□ -1.22
APOEP02649 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 WBP1LP1-201ENST00000460451 896 ntBASIC7.45□□□□□ -1.22
APOEP02649 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 TECRP2-201ENST00000503270 928 ntBASIC7.45□□□□□ -1.22
APOEP02649 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 AC011611.6-201ENST00000547483 255 ntBASIC7.45□□□□□ -1.22
APOEP02649 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 FAM30C-201ENST00000561158 410 ntBASIC7.45□□□□□ -1.22
APOEP02649 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 AC009955.2-201ENST00000597288 542 ntBASIC7.45□□□□□ -1.22
APOEP02649 AC137695.2-201ENST00000603123 754 ntBASIC7.45□□□□□ -1.22
APOEP02649 AC099777.1-201ENST00000603779 1070 ntBASIC7.45□□□□□ -1.22
APOEP02649 AL031777.2-201ENST00000611953 196 ntBASIC7.45□□□□□ -1.22
APOEP02649 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.45□□□□□ -1.22
APOEP02649 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.45□□□□□ -1.22
APOEP02649 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
APOEP02649 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
APOEP02649 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
APOEP02649 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 RNA5SP472-201ENST00000363868 119 ntBASIC7.44□□□□□ -1.22
APOEP02649 RPL12P1-201ENST00000374520 498 ntBASIC7.44□□□□□ -1.22
APOEP02649 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
APOEP02649 RBBP4P4-201ENST00000398588 1289 ntBASIC7.44□□□□□ -1.22
APOEP02649 AL117344.1-201ENST00000407196 616 ntBASIC7.44□□□□□ -1.22
APOEP02649 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.44□□□□□ -1.22
APOEP02649 AL161742.1-201ENST00000418154 584 ntBASIC7.44□□□□□ -1.22
APOEP02649 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.44□□□□□ -1.22
APOEP02649 AC134879.1-201ENST00000426062 394 ntBASIC7.44□□□□□ -1.22
APOEP02649 AC245047.1-201ENST00000433276 873 ntBASIC7.44□□□□□ -1.22
APOEP02649 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.44□□□□□ -1.22
APOEP02649 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.44□□□□□ -1.22
APOEP02649 OSTCP2-201ENST00000437956 444 ntBASIC7.44□□□□□ -1.22
APOEP02649 RPL21P33-201ENST00000444831 484 ntBASIC7.44□□□□□ -1.22
APOEP02649 RN7SL88P-201ENST00000480166 299 ntBASIC7.44□□□□□ -1.22
APOEP02649 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.44□□□□□ -1.22
APOEP02649 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.44□□□□□ -1.22
APOEP02649 RNA5SP518-201ENST00000515957 119 ntBASIC7.44□□□□□ -1.22
APOEP02649 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.44□□□□□ -1.22
APOEP02649 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
APOEP02649 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.44□□□□□ -1.22
APOEP02649 AC090774.2-201ENST00000584708 322 ntBASIC7.44□□□□□ -1.22
APOEP02649 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.44□□□□□ -1.22
APOEP02649 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms