Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 AC005034.3-201ENST00000604845 1747 ntBASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 AL049869.1-201ENST00000556933 1402 ntBASIC5.4□□□□□ -1.55
HLA-DRB4X5D2U9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 RNA5SP396-201ENST00000364834 120 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 RNA5SP427-201ENST00000365323 119 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 NHP2P2-201ENST00000396362 460 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 TAS2R2P-201ENST00000421146 910 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 OR7E117P-201ENST00000422682 1112 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 PSPC1P2-201ENST00000455130 225 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC004692.1-201ENST00000455430 424 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL182P-201ENST00000496499 300 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC008967.1-201ENST00000504843 163 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC095057.1-201ENST00000507583 168 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 RGS5-220ENST00000528689 566 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC009955.2-201ENST00000597288 542 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC008385.1-201ENST00000604421 355 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AL355333.1-201ENST00000605632 279 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AP000842.4-201ENST00000638781 748 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 AC092646.2-201ENST00000431242 2095 ntBASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DRB4X5D2U9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AL596244.1-201ENST00000567068 3779 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC127024.8-201ENST00000623719 2094 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 Z95114.1-201ENST00000624264 14574 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC017104.2-201ENST00000417000 321 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 SNX18P9-201ENST00000440580 835 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 EAF2-202ENST00000451944 960 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 VN1R6P-201ENST00000458417 907 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL834P-201ENST00000461450 286 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 PGBD4P1-201ENST00000473644 407 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC120057.1-201ENST00000483947 663 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL152P-201ENST00000484176 298 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC018523.1-201ENST00000534211 512 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 EGLN3P1-201ENST00000541727 720 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 UBE2CP4-201ENST00000561405 535 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms