Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC009963.3-201ENST00000458090 486 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AL352984.2-201ENST00000611153 546 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC007126.1-201ENST00000508202 4781 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 RANP6-201ENST00000413691 644 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC146944.3-201ENST00000509969 371 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 AC016180.1-201ENST00000567945 403 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 RN7SL404P-201ENST00000582421 281 ntBASIC7.02□□□□□ -1.29
CHD7Q9P2D1 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 HMGN1P36-201ENST00000446623 298 ntBASIC7.01□□□□□ -1.29
CHD7Q9P2D1 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 SAA3P-201ENST00000533267 365 ntBASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 HFE-207ENST00000357618 5286 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AC009237.3-203ENST00000442128 3551 ntBASIC7.01□□□□□ -1.29
CHD7Q9P2D1 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 DNAJC19P5-201ENST00000443295 316 ntBASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CHD7Q9P2D1 HSPD1P9-201ENST00000420325 1636 ntBASIC7□□□□□ -1.29
CHD7Q9P2D1 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CHD7Q9P2D1 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CHD7Q9P2D1 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC7□□□□□ -1.29
CHD7Q9P2D1 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 TMSB4XP2-201ENST00000335179 210 ntBASIC7□□□□□ -1.29
CHD7Q9P2D1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7□□□□□ -1.29
CHD7Q9P2D1 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7□□□□□ -1.29
CHD7Q9P2D1 AC099667.1-201ENST00000624222 469 ntBASIC7□□□□□ -1.29
CHD7Q9P2D1 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7□□□□□ -1.29
CHD7Q9P2D1 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 AC053481.2-202ENST00000582394 1500 ntBASIC7□□□□□ -1.29
CHD7Q9P2D1 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC7□□□□□ -1.29
CHD7Q9P2D1 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CHD7Q9P2D1 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CHD7Q9P2D1 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7□□□□□ -1.29
CHD7Q9P2D1 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms