Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH9Q9HC56 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 RNU6-1017P-201ENST00000363613 106 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC090114.1-201ENST00000393266 448 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 VN1R66P-201ENST00000412929 916 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 DUTP4-201ENST00000424782 475 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AL161626.1-201ENST00000441480 490 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC135721.2-201ENST00000464237 300 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC008417.1-201ENST00000510014 565 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC061975.3-201ENST00000583209 244 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 RPSAP66-201ENST00000592196 606 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 AP003175.1-201ENST00000641383 6658 ntBASIC7.3□□□□□ -1.24
PCDH9Q9HC56 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH9Q9HC56 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 RPL12P1-201ENST00000374520 498 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 RPL12P10-201ENST00000413498 498 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 RN7SL259P-201ENST00000478499 253 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC016144.1-201ENST00000548175 1087 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 NDUFA3P4-201ENST00000560814 250 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC111186.1-201ENST00000604684 130 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC113361.1-201ENST00000606683 543 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC027271.1-201ENST00000610270 610 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 pRNA.9-201ENST00000618609 89 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 TPTE2P2-201ENST00000403471 1466 ntBASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH9Q9HC56 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 TUBBP10-201ENST00000427668 1301 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms