Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL4A5P29400 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.18□□□□□ -1.1
COL4A5P29400 AC026898.1-201ENST00000586404 571 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 AC091167.5-201ENST00000605689 894 ntBASIC8.18□□□□□ -1.1
COL4A5P29400 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 RACGAP1P-201ENST00000550663 1879 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
COL4A5P29400 IPPKP1-201ENST00000422501 768 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.17□□□□□ -1.1
COL4A5P29400 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.17□□□□□ -1.1
COL4A5P29400 PNKDP1-201ENST00000435914 430 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 AMYP1-201ENST00000440059 1023 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.17□□□□□ -1.1
COL4A5P29400 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.17□□□□□ -1.1
COL4A5P29400 AC092718.4-201ENST00000566639 716 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.17□□□□□ -1.1
COL4A5P29400 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.17□□□□□ -1.1
COL4A5P29400 AL035422.2-201ENST00000603059 565 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 AC022613.3-201ENST00000560740 1346 ntBASIC8.17□□□□□ -1.1
COL4A5P29400 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL4A5P29400 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.17□□□□□ -1.1
COL4A5P29400 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.17□□□□□ -1.1
COL4A5P29400 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.16□□□□□ -1.1
COL4A5P29400 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.16□□□□□ -1.1
COL4A5P29400 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.16□□□□□ -1.1
COL4A5P29400 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 RPL12P13-201ENST00000310055 497 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
COL4A5P29400 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.16□□□□□ -1.1
COL4A5P29400 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.16□□□□□ -1.1
COL4A5P29400 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.16□□□□□ -1.1
COL4A5P29400 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.16□□□□□ -1.1
COL4A5P29400 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.16□□□□□ -1.1
COL4A5P29400 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.16□□□□□ -1.1
COL4A5P29400 RN7SKP35-201ENST00000517210 151 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 AC090115.2-201ENST00000548060 883 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.16□□□□□ -1.1
COL4A5P29400 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 AC096992.2-201ENST00000609553 1684 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 IPO7P2-201ENST00000451446 1750 ntBASIC8.16□□□□□ -1.1
COL4A5P29400 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.16□□□□□ -1.1
COL4A5P29400 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL4A5P29400 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
COL4A5P29400 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 MRPS6P2-201ENST00000381143 370 ntBASIC8.15□□□□□ -1.1
COL4A5P29400 DHFRP2-201ENST00000414224 547 ntBASIC8.15□□□□□ -1.1
COL4A5P29400 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.15□□□□□ -1.1
COL4A5P29400 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.15□□□□□ -1.1
COL4A5P29400 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.15□□□□□ -1.1
COL4A5P29400 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.15□□□□□ -1.1
COL4A5P29400 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.15□□□□□ -1.1
COL4A5P29400 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.15□□□□□ -1.1
COL4A5P29400 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.15□□□□□ -1.1
COL4A5P29400 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.15□□□□□ -1.1
COL4A5P29400 AC005632.2-201ENST00000564271 828 ntBASIC8.15□□□□□ -1.1
COL4A5P29400 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.15□□□□□ -1.1
COL4A5P29400 ANP32BP1-202ENST00000568553 737 ntBASIC8.15□□□□□ -1.1
COL4A5P29400 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.15□□□□□ -1.1
COL4A5P29400 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
COL4A5P29400 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms