Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC022613.3-201ENST00000560740 1346 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 GANC-206ENST00000566442 2512 ntTSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC129502.1-201ENST00000623261 1654 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC103591.2-201ENST00000265259 766 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 RPL36P1-201ENST00000419720 225 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 FMO7P-201ENST00000436045 768 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC002486.2-201ENST00000447806 590 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 RN7SL180P-201ENST00000466769 294 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC007956.1-201ENST00000555623 542 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AL355333.1-201ENST00000605632 279 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 AC037198.3-201ENST00000616754 526 ntBASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC10.72□□□□□ -0.69
RIMBP3Q9UFD9 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AL596244.1-201ENST00000567068 3779 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 CCNT2P1-201ENST00000423082 1315 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 PAH-201ENST00000307000 2466 ntTSL 5 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 GSTA7P-201ENST00000438425 448 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 RPSAP37-201ENST00000470913 821 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 OR5M14P-201ENST00000506803 618 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AC016405.2-201ENST00000607393 312 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 Mico1.1-201ENST00000611698 204 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 AL390882.1-201ENST00000618821 594 ntBASIC10.71□□□□□ -0.69
RIMBP3Q9UFD9 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 CDH8-211ENST00000584337 3986 ntTSL 5 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 AL133320.1-201ENST00000621423 2352 ntBASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
RIMBP3Q9UFD9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AL157702.1-201ENST00000398764 426 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AC244452.1-201ENST00000413798 141 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 RPL36AP39-201ENST00000445859 318 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 RPS10P20-201ENST00000494130 463 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 OR4A46P-201ENST00000527255 933 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 CR382285.1-202ENST00000604687 547 ntBASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
RIMBP3Q9UFD9 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms