Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 ENO1P4-201ENST00000416471 1785 ntBASIC6.74□□□□□ -1.33
SNX18Q96RF0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.74□□□□□ -1.33
SNX18Q96RF0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNX18Q96RF0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC126773.4-201ENST00000612545 3043 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 PPIAP22-201ENST00000358455 498 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 U3.1-201ENST00000362500 215 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 NXT2-204ENST00000372107 937 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 NUS1P4-201ENST00000401550 585 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AL353626.3-201ENST00000413399 657 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC106901.1-201ENST00000425086 698 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 RNF11P2-201ENST00000427702 440 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC245047.1-201ENST00000433276 873 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 HBBP1-201ENST00000433329 439 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 RPS21P1-201ENST00000434479 247 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 PHBP4-201ENST00000437447 837 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC115223.1-201ENST00000466377 870 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC109454.1-201ENST00000471205 498 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 OR4A46P-201ENST00000527255 933 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 RN7SL237P-201ENST00000580912 287 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC090415.1-201ENST00000581877 847 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 IGLJCOR18-201ENST00000584002 424 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AL512413.1-201ENST00000606489 382 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 MIR7162-201ENST00000611134 69 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 MIR6761-201ENST00000617899 72 ntBASIC6.73□□□□□ -1.33
SNX18Q96RF0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.73□□□□□ -1.33
SNX18Q96RF0 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNX18Q96RF0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL109918.1-202ENST00000406724 436 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 MIR1204-201ENST00000408388 67 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 RNU4-64P-201ENST00000410795 131 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 MTND4LP17-201ENST00000414607 293 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC004986.1-201ENST00000414855 607 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC127537.1-201ENST00000418183 748 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL606752.1-201ENST00000435442 666 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC002553.1-201ENST00000442828 802 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 KIF3AP1-201ENST00000454055 611 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 RPL7P17-201ENST00000470927 724 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 RN7SL815P-201ENST00000470970 290 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 RN7SL635P-201ENST00000492123 296 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms