Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 UQCRHP1-204ENST00000424609 274 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC009237.4-201ENST00000441078 238 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RPS4XP23-201ENST00000487801 237 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC079594.1-201ENST00000489757 331 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC068802.1-201ENST00000603420 732 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC090953.1-201ENST00000604305 1092 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC016542.3-201ENST00000623520 619 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 OR7E161P-202ENST00000641994 1033 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 AC092725.2-201ENST00000567658 1389 ntBASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZNF549Q6P9A3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
ZNF549Q6P9A3 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 NIP7P1-201ENST00000433227 512 ntBASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 RBMY3AP-201ENST00000449381 1145 ntBASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 RN7SL834P-201ENST00000461450 286 ntBASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC096743.1-201ENST00000485172 319 ntBASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZNF549Q6P9A3 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 DDX43P1-201ENST00000510713 1763 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 RNA5SP177-201ENST00000410122 107 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 EIF4A1P13-201ENST00000415667 230 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CYP4F34P-201ENST00000425951 481 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC135721.2-201ENST00000464237 300 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC018475.1-201ENST00000478358 465 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 RPS14P8-201ENST00000478778 369 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC079944.1-201ENST00000485426 495 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AP005202.1-201ENST00000489915 867 ntBASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.01□□□□□ -1.29
ZNF549Q6P9A3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms