Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 AC135068.4-201ENST00000622949 925 ntBASIC4.92□□□□□ -1.62
RPL39P62891 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RPL39P62891 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC4.92□□□□□ -1.62
RPL39P62891 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
RPL39P62891 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RPL39P62891 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 COG2-209ENST00000534989 2963 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 AC013488.1-201ENST00000526618 1838 ntBASIC4.91□□□□□ -1.62
RPL39P62891 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 RNA5SP448-201ENST00000363151 111 ntBASIC4.91□□□□□ -1.62
RPL39P62891 FAM204BP-201ENST00000369171 701 ntBASIC4.91□□□□□ -1.62
RPL39P62891 PPCS-204ENST00000372562 966 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 AMELY-202ENST00000383036 621 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 RPL23AP34-201ENST00000423483 410 ntBASIC4.91□□□□□ -1.62
RPL39P62891 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC4.91□□□□□ -1.62
RPL39P62891 CT45A11P-201ENST00000448043 1134 ntBASIC4.91□□□□□ -1.62
RPL39P62891 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 AL591438.2-201ENST00000452635 691 ntBASIC4.91□□□□□ -1.62
RPL39P62891 DBIL5P-202ENST00000453414 250 ntBASIC4.91□□□□□ -1.62
RPL39P62891 TUBB4BP2-201ENST00000454125 798 ntBASIC4.91□□□□□ -1.62
RPL39P62891 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC4.91□□□□□ -1.62
RPL39P62891 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC4.91□□□□□ -1.62
RPL39P62891 AC109454.1-201ENST00000471205 498 ntBASIC4.91□□□□□ -1.62
RPL39P62891 RPL12P5-201ENST00000475149 392 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC074386.1-206ENST00000487102 761 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC097263.1-201ENST00000496795 606 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC4.91□□□□□ -1.62
RPL39P62891 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC4.91□□□□□ -1.62
RPL39P62891 AC011611.6-201ENST00000547483 255 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AL591767.3-201ENST00000554632 525 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AC074051.4-201ENST00000564888 892 ntBASIC4.91□□□□□ -1.62
RPL39P62891 CDH13-207ENST00000565636 810 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AC092133.1-201ENST00000565828 719 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 RN7SL42P-201ENST00000579786 294 ntBASIC4.91□□□□□ -1.62
RPL39P62891 RN7SL667P-201ENST00000582817 298 ntBASIC4.91□□□□□ -1.62
RPL39P62891 MIR4642-201ENST00000583943 82 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 AC026951.2-201ENST00000613847 241 ntBASIC4.91□□□□□ -1.62
RPL39P62891 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RPL39P62891 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AP003068.4-201ENST00000623192 802 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC005785.2-201ENST00000624655 631 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AC127071.1-201ENST00000624997 712 ntBASIC4.91□□□□□ -1.62
RPL39P62891 AL139254.2-202ENST00000641937 1156 ntBASIC4.91□□□□□ -1.62
RPL39P62891 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RPL39P62891 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPL39P62891 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC4.91□□□□□ -1.62
RPL39P62891 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms