Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC089998.1-201ENST00000548575 3141 ntBASIC6.52□□□□□ -1.37
P04436 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
P04436 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 AC010329.1-201ENST00000593903 8328 ntBASIC6.52□□□□□ -1.37
P04436 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.52□□□□□ -1.37
P04436 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
P04436 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 CDY3P-201ENST00000454543 1618 ntBASIC6.52□□□□□ -1.37
P04436 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
P04436 RN7SKP268-201ENST00000411107 316 ntBASIC6.52□□□□□ -1.37
P04436 RNA5SP280-201ENST00000411230 115 ntBASIC6.52□□□□□ -1.37
P04436 SETP22-201ENST00000412243 957 ntBASIC6.52□□□□□ -1.37
P04436 AL590240.2-201ENST00000413370 894 ntBASIC6.52□□□□□ -1.37
P04436 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.52□□□□□ -1.37
P04436 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.52□□□□□ -1.37
P04436 GAPDHP69-201ENST00000425504 1008 ntBASIC6.52□□□□□ -1.37
P04436 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.52□□□□□ -1.37
P04436 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 FTLP17-201ENST00000432567 525 ntBASIC6.52□□□□□ -1.37
P04436 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.52□□□□□ -1.37
P04436 AC093325.1-201ENST00000508378 326 ntBASIC6.52□□□□□ -1.37
P04436 RBMS2P1-201ENST00000525031 1226 ntBASIC6.52□□□□□ -1.37
P04436 OR5M6P-201ENST00000530227 937 ntBASIC6.52□□□□□ -1.37
P04436 AC079866.1-201ENST00000534985 1220 ntBASIC6.52□□□□□ -1.37
P04436 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.52□□□□□ -1.37
P04436 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.52□□□□□ -1.37
P04436 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 AP005329.3-201ENST00000609924 686 ntBASIC6.52□□□□□ -1.37
P04436 AL161420.1-201ENST00000619393 264 ntBASIC6.52□□□□□ -1.37
P04436 AC012629.3-201ENST00000623397 328 ntBASIC6.52□□□□□ -1.37
P04436 AC087894.3-201ENST00000623682 349 ntBASIC6.52□□□□□ -1.37
P04436 AC130456.6-201ENST00000623745 765 ntBASIC6.52□□□□□ -1.37
P04436 AC006453.3-201ENST00000635891 377 ntBASIC6.52□□□□□ -1.37
P04436 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
P04436 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.52□□□□□ -1.37
P04436 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
P04436 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.52□□□□□ -1.37
P04436 AL356361.1-201ENST00000400943 1459 ntBASIC6.52□□□□□ -1.37
P04436 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.52□□□□□ -1.37
P04436 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
P04436 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.52□□□□□ -1.37
P04436 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
P04436 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P04436 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
P04436 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC6.51□□□□□ -1.37
P04436 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.51□□□□□ -1.37
P04436 AL445250.1-203ENST00000641829 1535 ntBASIC6.51□□□□□ -1.37
P04436 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC6.51□□□□□ -1.37
P04436 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.51□□□□□ -1.37
P04436 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
P04436 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 PDCL3P5-201ENST00000398028 722 ntBASIC6.51□□□□□ -1.37
P04436 RBBP4P4-201ENST00000398588 1289 ntBASIC6.51□□□□□ -1.37
P04436 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
P04436 AL451061.1-201ENST00000407887 862 ntBASIC6.51□□□□□ -1.37
P04436 RN7SKP254-201ENST00000410685 310 ntBASIC6.51□□□□□ -1.37
P04436 SNRPEP5-201ENST00000425442 278 ntBASIC6.51□□□□□ -1.37
P04436 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.51□□□□□ -1.37
P04436 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P04436 AL121916.1-201ENST00000429405 308 ntBASIC6.51□□□□□ -1.37
P04436 AC009518.3-201ENST00000438972 253 ntBASIC6.51□□□□□ -1.37
P04436 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
P04436 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.51□□□□□ -1.37
P04436 AL133480.2-201ENST00000456723 487 ntBASIC6.51□□□□□ -1.37
P04436 SNORA81.1-201ENST00000458922 177 ntBASIC6.51□□□□□ -1.37
P04436 RN7SL149P-201ENST00000465197 281 ntBASIC6.51□□□□□ -1.37
P04436 AC126615.1-201ENST00000470084 630 ntBASIC6.51□□□□□ -1.37
P04436 RN7SL88P-201ENST00000480166 299 ntBASIC6.51□□□□□ -1.37
P04436 AL079303.1-201ENST00000486611 463 ntBASIC6.51□□□□□ -1.37
P04436 MTCO1P55-201ENST00000489829 745 ntBASIC6.51□□□□□ -1.37
P04436 AP005202.1-201ENST00000489915 867 ntBASIC6.51□□□□□ -1.37
P04436 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.51□□□□□ -1.37
P04436 DCAF13P2-201ENST00000514188 555 ntBASIC6.51□□□□□ -1.37
P04436 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.51□□□□□ -1.37
P04436 GLYATL1P4-201ENST00000529326 906 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms