Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
LINC01558Q9Y6Z2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AC008894.3-201ENST00000624324 3103 ntBASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AL596257.1-201ENST00000641463 2694 ntBASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AC018695.7-201ENST00000624587 2492 ntBASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01558Q9Y6Z2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 CAHM-201ENST00000604200 896 ntBASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC01558Q9Y6Z2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms