Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.04■■□□□ 1.12
SCN10AQ9Y5Y9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 MESTP1-201ENST00000404287 994 ntBASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 AL445675.2-201ENST00000620291 557 ntBASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 PLK5-205ENST00000642079 1969 ntBASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCN10AQ9Y5Y9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 KRT18P22-201ENST00000402024 1347 ntBASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.02■■□□□ 1.12
SCN10AQ9Y5Y9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 NAPSB-206ENST00000562112 1266 ntBASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 DGCR10-201ENST00000609839 495 ntBASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCN10AQ9Y5Y9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms