Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RAI2Q9Y5P3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 AC006557.6-201ENST00000623071 864 ntBASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI2Q9Y5P3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RAI2Q9Y5P3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.2■□□□□ 0.83
RAI2Q9Y5P3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 AL391422.3-201ENST00000603791 2761 ntBASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 AC006058.3-201ENST00000606217 1069 ntBASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI2Q9Y5P3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 UNC93B5-201ENST00000530315 699 ntBASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI2Q9Y5P3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 AC099778.1-201ENST00000568593 1911 ntBASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 BX119927.1-201ENST00000636596 1552 ntBASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 AC128676.1-201ENST00000454392 318 ntBASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms