Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 CDCA4P2-201ENST00000441182 718 ntBASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AC087289.5-201ENST00000586076 3175 ntBASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 TCF3P1-201ENST00000423021 1937 ntBASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 AL355472.2-201ENST00000422958 438 ntBASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 AC026185.1-201ENST00000445748 174 ntBASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA11Q9Y5H2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 BX119927.1-201ENST00000636596 1552 ntBASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHGA11Q9Y5H2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA11Q9Y5H2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PCDHGA11Q9Y5H2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDHGA11Q9Y5H2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA11Q9Y5H2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA11Q9Y5H2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 AC093787.1-201ENST00000450396 207 ntBASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHGA11Q9Y5H2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGA11Q9Y5H2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 AF201337.1-201ENST00000520239 748 ntBASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms