Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AF201337.1-201ENST00000520239 748 ntBASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB3Q9Y5G1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 SLC29A4P1-201ENST00000398760 971 ntBASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGB3Q9Y5G1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 GUSBP6-202ENST00000438529 1198 ntBASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 OR10C1-204ENST00000622521 1039 ntBASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGB3Q9Y5G1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 AL512625.2-201ENST00000417533 625 ntBASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 AC100791.3-201ENST00000617619 330 ntBASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 AC008694.1-202ENST00000636953 945 ntBASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 AC068338.2-201ENST00000563278 1430 ntBASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB3Q9Y5G1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 AC069236.1-201ENST00000604339 616 ntBASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 AC087633.2-202ENST00000565166 1439 ntBASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB3Q9Y5G1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGB3Q9Y5G1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms