Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGC4Q9Y5F7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 AP003097.1-201ENST00000530657 1135 ntBASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 AC112907.3-201ENST00000577781 2400 ntBASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGC4Q9Y5F7 AC099778.1-201ENST00000568593 1911 ntBASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 AC026366.1-201ENST00000488803 879 ntBASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGC4Q9Y5F7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 AC008687.6-201ENST00000596318 630 ntBASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 BX119927.1-201ENST00000636596 1552 ntBASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGC4Q9Y5F7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 POU5F1P3-201ENST00000428824 1078 ntBASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AC120498.8-201ENST00000614275 531 ntBASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms