Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 FAM86EP-206ENST00000510506 987 ntBASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRRAPQ9Y4A5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 LIN28AP1-201ENST00000429574 405 ntBASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRRAPQ9Y4A5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 FSCN1P1-201ENST00000568912 1481 ntBASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 PGM5P4-201ENST00000421970 445 ntBASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRRAPQ9Y4A5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AC005332.1-201ENST00000577698 1310 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AP000347.1-202ENST00000435868 847 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AC116407.4-201ENST00000623319 1061 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 FAM207BP-201ENST00000447172 505 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AL359075.1-203ENST00000462729 1002 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AC023511.2-201ENST00000618803 211 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 PTBP1P-201ENST00000554374 1601 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AC011484.1-201ENST00000377652 1995 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 AL121906.2-201ENST00000621597 723 ntBASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRRAPQ9Y4A5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 AC011558.1-201ENST00000623459 338 ntBASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRRAPQ9Y4A5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 AC093458.2-201ENST00000623150 629 ntBASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 KSR1P1-201ENST00000446298 240 ntBASIC15.24■□□□□ 0.03
TRRAPQ9Y4A5 AP002982.1-201ENST00000492365 877 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms