Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 B3GAT3P1-201ENST00000471720 806 ntBASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.33■■□□□ 1.65
RTCBQ9Y3I0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 AP006587.1-201ENST00000534129 1502 ntBASIC25.32■■□□□ 1.64
RTCBQ9Y3I0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 AC233723.2-201ENST00000623798 2106 ntBASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 AC128688.1-201ENST00000487626 519 ntBASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTCBQ9Y3I0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 AK4P3-201ENST00000418260 669 ntBASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 AC011506.1-201ENST00000474329 610 ntBASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 AC244015.2-201ENST00000616358 1861 ntBASIC25.3■■□□□ 1.64
RTCBQ9Y3I0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 AC121338.2-201ENST00000622535 1744 ntBASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 CRYGFP-201ENST00000418459 633 ntBASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 BX664615.1-201ENST00000443558 458 ntBASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 AC097488.1-201ENST00000507834 756 ntBASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 KRT8P17-201ENST00000453110 1448 ntBASIC25.29■■□□□ 1.64
RTCBQ9Y3I0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTCBQ9Y3I0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 AC022616.7-201ENST00000525383 220 ntBASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 FAM87A-204ENST00000613235 858 ntBASIC25.27■■□□□ 1.64
RTCBQ9Y3I0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 INGX-201ENST00000359239 846 ntBASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 UPK3BP1-201ENST00000428678 509 ntBASIC25.26■■□□□ 1.63
RTCBQ9Y3I0 AC004980.1-204ENST00000429707 299 ntBASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms