Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 AC126544.1-201ENST00000580842 1059 ntBASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 AC105233.4-201ENST00000642045 216 ntBASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RCL1Q9Y2P8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 AC245052.3-201ENST00000450182 901 ntBASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 AC008175.2-201ENST00000612840 297 ntBASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 AC007613.1-201ENST00000572811 2597 ntBASIC16.29■□□□□ 0.2
RCL1Q9Y2P8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 AC233992.3-201ENST00000607491 485 ntBASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.28■□□□□ 0.2
RCL1Q9Y2P8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms