Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
SMG5Q9UPR3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SMG5Q9UPR3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SMG5Q9UPR3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 PNMA6B-201ENST00000538162 1200 ntBASIC20.95■□□□□ 0.94
SMG5Q9UPR3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMG5Q9UPR3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AC020907.5-201ENST00000624372 1936 ntBASIC20.94■□□□□ 0.94
SMG5Q9UPR3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AL355472.2-201ENST00000422958 438 ntBASIC20.94■□□□□ 0.94
SMG5Q9UPR3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AC233263.1-201ENST00000578059 224 ntBASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AC121338.2-201ENST00000622535 1744 ntBASIC20.94■□□□□ 0.94
SMG5Q9UPR3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AL391422.3-201ENST00000603791 2761 ntBASIC20.94■□□□□ 0.94
SMG5Q9UPR3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMG5Q9UPR3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.93■□□□□ 0.94
SMG5Q9UPR3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.93■□□□□ 0.94
SMG5Q9UPR3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SMG5Q9UPR3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 AC069544.1-201ENST00000609399 999 ntBASIC20.92■□□□□ 0.94
SMG5Q9UPR3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.92■□□□□ 0.94
SMG5Q9UPR3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMG5Q9UPR3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms