Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHGB4Q9UN71 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGB4Q9UN71 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB4Q9UN71 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB4Q9UN71 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 MIR2861-201ENST00000636310 90 ntBASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB4Q9UN71 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 KRT19P1-201ENST00000405746 1186 ntBASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 SLC7A5P1-201ENST00000568957 537 ntBASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB4Q9UN71 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 AC243732.1-201ENST00000612648 864 ntBASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB4Q9UN71 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 AC004854.2-201ENST00000608450 1441 ntBASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 AC007322.3-201ENST00000426526 701 ntBASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB4Q9UN71 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB4Q9UN71 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms