Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHTF1Q9UMS5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PHTF1Q9UMS5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHTF1Q9UMS5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHTF1Q9UMS5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 AL355802.2-201ENST00000402069 882 ntBASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 LSM12P1-201ENST00000411836 588 ntBASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 AL138781.1-201ENST00000566567 1274 ntBASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 AL589743.5-201ENST00000616611 1050 ntBASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.56■□□□□ 0.88
PHTF1Q9UMS5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 AC092118.2-201ENST00000613495 667 ntBASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 MIR2861-201ENST00000636310 90 ntBASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 FP700111.2-201ENST00000619190 1892 ntBASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PHTF1Q9UMS5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 KRT17P1-201ENST00000399211 1546 ntBASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 AC073210.2-201ENST00000430369 194 ntBASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.54■□□□□ 0.88
PHTF1Q9UMS5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 AL356652.1-201ENST00000615962 565 ntBASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 AC133041.1-202ENST00000642053 222 ntBASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
PHTF1Q9UMS5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHTF1Q9UMS5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms