Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 AC013268.1-206ENST00000638368 961 ntBASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 AC112229.1-201ENST00000639295 961 ntBASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 MIR663A-201ENST00000385250 93 ntBASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 AC007322.4-201ENST00000509611 723 ntBASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 AC243732.1-201ENST00000612648 864 ntBASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT11Q9UKZ1 AC026471.1-201ENST00000564629 3026 ntBASIC19.14■□□□□ 0.66
CNOT11Q9UKZ1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNOT11Q9UKZ1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.14■□□□□ 0.66
CNOT11Q9UKZ1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 AC006970.2-201ENST00000450065 779 ntBASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 AC005181.1-201ENST00000604782 1256 ntBASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 AL050303.2-201ENST00000619798 666 ntBASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CNOT11Q9UKZ1 AC011484.1-201ENST00000377652 1995 ntBASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT11Q9UKZ1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNOT11Q9UKZ1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms