Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRDM4Q9UKN5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.6■□□□□ 0.89
PRDM4Q9UKN5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM4Q9UKN5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 MIR4787-201ENST00000607364 84 ntBASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.58■□□□□ 0.89
PRDM4Q9UKN5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 C17orf82-201ENST00000623772 1530 ntBASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PRDM4Q9UKN5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM4Q9UKN5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRDM4Q9UKN5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms