Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.82■□□□□ 0.6
CTSFQ9UBX1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 AC133681.1-201ENST00000465482 601 ntBASIC18.81■□□□□ 0.6
CTSFQ9UBX1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 KRT8P17-201ENST00000453110 1448 ntBASIC18.81■□□□□ 0.6
CTSFQ9UBX1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
CTSFQ9UBX1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 PRKY-204ENST00000533551 1019 ntBASIC18.8■□□□□ 0.6
CTSFQ9UBX1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSFQ9UBX1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 AL596275.1-201ENST00000423464 877 ntBASIC18.79■□□□□ 0.6
CTSFQ9UBX1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.79■□□□□ 0.6
CTSFQ9UBX1 AL121829.2-201ENST00000620908 328 ntBASIC18.79■□□□□ 0.6
CTSFQ9UBX1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSFQ9UBX1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 SMG8-203ENST00000578922 2178 ntBASIC18.78■□□□□ 0.6
CTSFQ9UBX1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 Z99916.2-201ENST00000604037 246 ntBASIC18.78■□□□□ 0.6
CTSFQ9UBX1 AC110285.5-201ENST00000611501 352 ntBASIC18.78■□□□□ 0.6
CTSFQ9UBX1 AL121906.2-201ENST00000621597 723 ntBASIC18.78■□□□□ 0.6
CTSFQ9UBX1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSFQ9UBX1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSFQ9UBX1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSFQ9UBX1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSFQ9UBX1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTSFQ9UBX1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms