Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 AC073314.1-201ENST00000568729 2216 ntBASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPARGC1AQ9UBK2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PPARGC1AQ9UBK2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 PTBP1P-201ENST00000554374 1601 ntBASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 AC023632.3-201ENST00000521633 145 ntBASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 KRT18P6-201ENST00000555540 1265 ntBASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PPARGC1AQ9UBK2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 AC060766.5-201ENST00000590539 871 ntBASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.75■□□□□ 0.91
PPARGC1AQ9UBK2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 DPP3P2-201ENST00000416030 1696 ntBASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.74■□□□□ 0.91
PPARGC1AQ9UBK2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.73■□□□□ 0.91
PPARGC1AQ9UBK2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms