Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 Z82202.1-201ENST00000623446 1880 ntBASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCX3AQ9NNX9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 AC106820.2-201ENST00000563775 3264 ntBASIC18.66■□□□□ 0.58
VCX3AQ9NNX9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCX3AQ9NNX9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCX3AQ9NNX9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCX3AQ9NNX9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VCX3AQ9NNX9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCX3AQ9NNX9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCX3AQ9NNX9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3AQ9NNX9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3AQ9NNX9 AC010141.3-201ENST00000456659 717 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms