Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 AL589743.5-201ENST00000616611 1050 ntBASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 AC073111.5-205ENST00000641717 521 ntBASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEUROD4Q9HD90 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 CDCA4P2-201ENST00000441182 718 ntBASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 AL031963.3-201ENST00000606441 850 ntBASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEUROD4Q9HD90 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 AC006970.2-201ENST00000450065 779 ntBASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 KRT8P20-201ENST00000423953 1409 ntBASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 KRT8P17-201ENST00000453110 1448 ntBASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEUROD4Q9HD90 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 AL512625.2-201ENST00000417533 625 ntBASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 KRT16P6-202ENST00000425692 1426 ntBASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 AC010980.2-201ENST00000587099 1412 ntBASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEUROD4Q9HD90 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.8■□□□□ 0.6
NEUROD4Q9HD90 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms