Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE5Q9HCH3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
CPNE5Q9HCH3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE5Q9HCH3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE5Q9HCH3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE5Q9HCH3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.27■□□□□ 0.67
CPNE5Q9HCH3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE5Q9HCH3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 AC007322.3-201ENST00000426526 701 ntBASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE5Q9HCH3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 AC105020.6-201ENST00000621523 1217 ntBASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE5Q9HCH3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE5Q9HCH3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE5Q9HCH3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms