Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
EFCC1Q9HA90 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 SLC25A3P1-201ENST00000443844 931 ntBASIC23.29■■□□□ 1.32
EFCC1Q9HA90 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 AL121829.2-201ENST00000620908 328 ntBASIC23.29■■□□□ 1.32
EFCC1Q9HA90 NBPF21P-201ENST00000425093 1451 ntBASIC23.29■■□□□ 1.32
EFCC1Q9HA90 CYP2D8P-201ENST00000433633 1490 ntBASIC23.29■■□□□ 1.32
EFCC1Q9HA90 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
EFCC1Q9HA90 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.28■■□□□ 1.32
EFCC1Q9HA90 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 AC010947.1-201ENST00000623454 693 ntBASIC23.27■■□□□ 1.32
EFCC1Q9HA90 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.27■■□□□ 1.32
EFCC1Q9HA90 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
EFCC1Q9HA90 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.26■■□□□ 1.31
EFCC1Q9HA90 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
EFCC1Q9HA90 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 AL390955.1-201ENST00000428694 934 ntBASIC23.25■■□□□ 1.31
EFCC1Q9HA90 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 GUSBP5-202ENST00000510805 1989 ntBASIC23.25■■□□□ 1.31
EFCC1Q9HA90 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
EFCC1Q9HA90 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 FITM1-202ENST00000559294 800 ntBASIC23.24■■□□□ 1.31
EFCC1Q9HA90 WWOX-216ENST00000569818 525 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms