Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNF1Q9H3M0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KCNF1Q9H3M0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNF1Q9H3M0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.79■■□□□ 1.08
KCNF1Q9H3M0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KCNF1Q9H3M0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 AC135050.7-201ENST00000624508 2218 ntBASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KCNF1Q9H3M0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
KCNF1Q9H3M0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
KCNF1Q9H3M0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KCNF1Q9H3M0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.77■■□□□ 1.07
KCNF1Q9H3M0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KCNF1Q9H3M0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 AC008175.2-201ENST00000612840 297 ntBASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KCNF1Q9H3M0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.74■■□□□ 1.07
KCNF1Q9H3M0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms