Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 FBXW4P1-201ENST00000426721 2239 ntBASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC121338.2-201ENST00000622535 1744 ntBASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 AL049796.1-201ENST00000565336 1766 ntBASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 PLK5-205ENST00000642079 1969 ntBASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
KRTAP4-1Q9BYQ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 PPP1R14BP5-201ENST00000440334 435 ntBASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 B3GAT3P1-201ENST00000471720 806 ntBASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC087388.1-201ENST00000571370 1112 ntBASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 EP400NL-214ENST00000641289 2402 ntBASIC10.41□□□□□ -0.74
KRTAP4-1Q9BYQ7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP4-1Q9BYQ7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms