Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 pRNA.6-201ENST00000610482 90 ntBASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 pRNA.5-201ENST00000612139 90 ntBASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 pRNA.11-201ENST00000618423 90 ntBASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 pRNA.13-201ENST00000619112 90 ntBASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LCE3DQ9BYE3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 LETM1P2-201ENST00000597330 2178 ntBASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC125437.2-201ENST00000625180 2167 ntBASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 OR2I1P-207ENST00000453522 948 ntBASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 MTDHP2-201ENST00000601468 714 ntBASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 AL117332.1-201ENST00000622628 974 ntBASIC5.38□□□□□ -1.55
LCE3DQ9BYE3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms