Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
YIPF4Q9BSR8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
YIPF4Q9BSR8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YIPF4Q9BSR8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YIPF4Q9BSR8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 GPX1P1-201ENST00000388829 606 ntBASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 AC105020.6-201ENST00000621523 1217 ntBASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 OR10C1-204ENST00000622521 1039 ntBASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
YIPF4Q9BSR8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 NCF1B-203ENST00000435988 1254 ntBASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.77■□□□□ 0.6
YIPF4Q9BSR8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF4Q9BSR8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
YIPF4Q9BSR8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
YIPF4Q9BSR8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
YIPF4Q9BSR8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 AL691432.2-201ENST00000607222 2038 ntBASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 KRT17P1-201ENST00000399211 1546 ntBASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 AL050303.2-201ENST00000619798 666 ntBASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
YIPF4Q9BSR8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 BX119927.1-201ENST00000636596 1552 ntBASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
YIPF4Q9BSR8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 AC105036.2-201ENST00000569468 176 ntBASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF4Q9BSR8 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.73■□□□□ 0.59
YIPF4Q9BSR8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms